Protein ZmHB53
ZmHB53 is a protein in the Homeobox family.
Information
TF Name: ZmHB53
Species: Maize
TF Family: Homeobox
Gene Name(Synonym): HB53
Uniprot ID: B6UCL5

Protein ZmHB53

ZmHB53 is a protein in the Homeobox family.

Overview of domains present in v5 transcripts
PF00046PF02183
Zm00001eb074830_T003
Zm00001eb074830_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d002754DAPseq no logo sequence fimo position
Zm00001d002754DAPseq no logo sequence fimo position
Zm00001d002754ChIPseq no logo sequence fimo position
Zm00001d002754PChIPseq no logo sequence fimo position

Interactions where ZmHB53 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHB53 is the target  
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There are 109 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb074830_T003 from maize genome v5

Amino Acid Sequence
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MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00046
PF02183
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Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...

GRMZM2G044752_T01 from maize genome v3


Related TFome: pUT6644

Amino Acid Sequence
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MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...

GRMZM2G044752_T02 from maize genome v3

Amino Acid Sequence
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MHCMAGISLSFLPLARSLHSVVQDEAEADGGGLRVPEALLRDADGGEPAAAEGGAGAPRAQARVAAPLHAHVPAHHPHHV
PLLRARLLVQRQLRSCHGGRARARRRRRRRHRLPPDRPSH

Nucleotide Sequence
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CGTCTATCAGCCAGCTCCATTCTAT...

GRMZM2G044752_T03 from maize genome v3

Amino Acid Sequence
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MPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEV
WFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAA
ATAAARARAGAGAGAIVCHPIDRATST

Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...

GRMZM2G044752_T04 from maize genome v3

Amino Acid Sequence
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MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPVSTSSIVVAASIKSYSSVVHPPGRSPRLLMDERTARLGSSSFQSFAGSRPYQPACDCDC
DCELY

Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...

GRMZM2G044752_T05 from maize genome v3

Amino Acid Sequence
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MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARYVRSAHAICRRALARVC

Nucleotide Sequence
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CGTCTATCAGCCAGCTCCATTCTAT...

Zm00001d002754_T001 from maize genome v4

Amino Acid Sequence
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MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQ
ELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAAATAAARARAGAGAGAIVCHPIDRATST

Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...

Zm00001eb074830_T001 from maize genome v5

Amino Acid Sequence
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MPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKAALAQQLGLRPRQVEV
WFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMHMSPPTTLTMCPSCERVSSSNGNSAA
ATAAARARAGAGAGAIVCHPIDRATST

Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...

Zm00001eb074830_T002 from maize genome v5

Amino Acid Sequence
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MMERVEDLGLSLSLSSSLASPRTHHVATMLLRAPEKRFLEMPLLLPAKRTTEVTGEDGLRGGSDEEDGGCGIDGSRKKLR
LSKDQSAVLEDSFREHPTLNPVSTSSIVVAASIKSYSSVVHPPGRSPRLLMDERTARLGSSSFQSFAGSRPYQPACDCDC
DCELY

Nucleotide Sequence
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ATCACCTTCATCGTCTATCAGCCAG...


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